Prototypes
LALInferenceProposal *	LALInferenceInitProposal (LALInferenceProposalFunction func, const char *name)
	Creates a new proposal object from the given func pointer and name. More...

void	LALInferenceRegisterProposal (LALInferenceVariables propArgs, const char name, INT4 flag, ProcessParamsTable command_line)
	Use a default flag and a check of the command-line to set proposal flags in proposal args. More...

void	LALInferenceAddProposalToCycle (LALInferenceProposalCycle cycle, LALInferenceProposal prop, INT4 weight)
	Adds weight copies of the proposal prop to the end of the proposal cycle. More...

void	LALInferenceRandomizeProposalCycle (LALInferenceProposalCycle cycle, gsl_rng rng)
	Randomizes the order of the proposals in the proposal cycle. More...

LALInferenceProposalCycle *	LALInferenceInitProposalCycle (void)
	Create a new proposal cycle. More...

LALInferenceVariables *	LALInferenceParseProposalArgs (LALInferenceRunState *runState)
	Go through all logic for deciding proposals to use. More...

REAL8	LALInferenceCyclicProposal (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Proposes a jump from the next proposal in the proposal cycle. More...

void	LALInferenceDeleteProposalCycle (LALInferenceProposalCycle *cycle)
	Completely remove the current proposal cycle, freeing the associated memory. More...

LALInferenceProposalCycle *	LALInferenceSetupDefaultInspiralProposalCycle (LALInferenceVariables *propArgs)
	A reasonable default proposal. More...

REAL8	LALInferenceSingleProposal (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Non-adaptive, sigle-variable update proposal with reasonable widths in each dimension. More...

REAL8	LALInferenceSingleAdaptProposal (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Like LALInferenceSingleProposal() but will use adaptation if the –adapt command-line flag given. More...

REAL8	LALInferencePolarizationPhaseJump (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Polarization-phase exact degeneracy. More...

REAL8	LALInferenceCorrPolarizationPhaseJump (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Polarization-phase correlation jump. More...

REAL8	LALInferenceCovarianceEigenvectorJump (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Choose a random covariance matrix eigenvector to jump along. More...

REAL8	LALInferenceSkyLocWanderJump (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Jump around by 0.01 radians in angle on the sky. More...

REAL8	LALInferenceDifferentialEvolutionFull (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Differential evolution, on all non-fixed, non-output parameters. More...

REAL8	LALInferenceDifferentialEvolutionNames (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables proposedParams, const char names[])
	Perform differential evolution on the parameters of the given names (the names array should be terminated by a NULL pointer). More...

REAL8	LALInferenceDifferentialEvolutionIntrinsic (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Perform differential evolution on only the intrinsic parameters. More...

REAL8	LALInferenceDifferentialEvolutionExtrinsic (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Perform a differential evolution step on only the extrinsic parameters. More...

REAL8	LALInferenceDrawApproxPrior (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Draws from an approximation to the true prior. More...

REAL8	LALInferenceDrawFlatPrior (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Draws from a flat prior for all variables where are flat prior is specified. More...

REAL8	LALInferenceSkyReflectDetPlane (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Reflects the sky location through the plane formed by three detectors. More...

REAL8	LALInferenceSkyRingProposal (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)

REAL8	LALInferenceGlitchMorletProposal (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)

REAL8	LALInferenceGlitchMorletReverseJump (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)

REAL8	LALInferencePSDFitJump (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)

REAL8	LALInferenceExtrinsicParamProposal (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Proposal for the extrinsic parameters. More...

REAL8	LALInferenceFrequencyBinJump (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Proposal to jump in frequency by one frequency bin. More...

REAL8	LALInferenceDistanceLikelihoodProposal (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	Proposal which draws a sample from the distance likelihood function Requires the currentParams to have optimal_snr and matched_filter_snr. More...

void	LALInferenceZeroProposalStats (LALInferenceProposalCycle *cycle)

void	LALInferenceTrackProposalAcceptance (LALInferenceThreadState *thread)
	Function for updating proposal acceptance rates if tracking. More...

void	LALInferenceUpdateAdaptiveJumps (LALInferenceThreadState *thread, REAL8 targetAcceptance)
	Helper function to update the adaptive steps after each jump. More...

void	LALInferenceSetupClusteredKDEProposalsFromASCII (LALInferenceThreadState thread, FILE input, INT4 burnin, REAL8 weight, INT4 ptmcmc)
	Setup all clustered-KDE proposals with samples read from file. More...

void	LALInferenceAddClusteredKDEProposalToSet (LALInferenceVariables propArgs, LALInferenceClusteredKDE kde)
	Add a KDE proposal to the KDE proposal set. More...

void	LALInferenceDestroyClusteredKDEProposal (LALInferenceClusteredKDE *proposal)
	Destroy an existing clustered-KDE proposal. More...

void	LALInferenceSetupClusteredKDEProposalFromDEBuffer (LALInferenceThreadState *thread)
	Setup a clustered-KDE proposal from the differential evolution buffer. More...

void	LALInferenceSetupClusteredKDEProposalFromRun (LALInferenceThreadState thread, REAL8 samples, INT4 size, INT4 cyclic_reflective, INT4 ntrials)
	Setup a clustered-KDE proposal from the parameters in a run. More...

REAL8	LALInferenceClusteredKDEProposal (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables *proposedParams)
	A proposal based on the clustered kernal density estimate of a set of samples. More...

REAL8	LALInferenceStoredClusteredKDEProposal (LALInferenceThreadState thread, LALInferenceVariables currentParams, LALInferenceVariables proposedParams, REAL8 propDensity)
	An interface to the KDE proposal that avoids a KDE evaluation if possible. More...

void	LALInferenceInitClusteredKDEProposal (LALInferenceThreadState thread, LALInferenceClusteredKDE kde, REAL8 array, INT4 nSamps, LALInferenceVariables params, const char name, REAL8 weight, LALInferenceKmeans (cluster_method)(gsl_matrix , INT4, gsl_rng *), INT4 cyclic_reflective, INT4 ntrials)
	Initialize a clustered-KDE proposal. More...

void	LALInferenceDumpClusteredKDE (LALInferenceClusteredKDE kde, char outp_name, REAL8 *array)
	Dump draws from a KDE to file. More...

void	LALInferenceDumpClusteredKDEDraws (LALInferenceClusteredKDE kde, char outp_name, INT4 nSamps)
	Dump clustered KDE information to file. More...

void	LALInferenceComputeMaxAutoCorrLenFromDE (LALInferenceThreadState thread, INT4 maxACL)
	A wrapper for the KDE proposal that doesn't store KDE evaluations. More...

REAL8	LALInferenceComputeMaxAutoCorrLen (REAL8 *array, INT4 nPoints, INT4 nPar)
	Compute the maximum single-parameter autocorrelation length. More...

void	LALInferenceUpdateMaxAutoCorrLen (LALInferenceThreadState *thread)
	Update the estimatate of the autocorrelation length. More...

INT4	LALInferenceComputeEffectiveSampleSize (LALInferenceThreadState *thread)
	Determine the effective sample size based on the DE buffer. More...

void	LALInferenceSetupAdaptiveProposals (LALInferenceVariables propArgs, LALInferenceVariables params)
	Helper function to setup the adaptive step proposals before the run. More...

void	LALInferenceSetupGlitchProposal (LALInferenceIFOData data, LALInferenceVariables propArgs)
	Setup glitch-related stuff. More...

int	LALInferencePrintProposalTrackingHeader (FILE fp, LALInferenceVariables params)
	Output proposal tracking header to file *fp. More...

void	LALInferencePrintProposalTracking (FILE fp, LALInferenceProposalCycle cycle, LALInferenceVariables theta, LALInferenceVariables theta_prime, REAL8 logPropRatio, INT4 accepted)
	Output proposal tracking information to file *fp. More...

REAL8	LALInferenceEnsembleStretchFull (LALInferenceThreadState thread, LALInferenceVariables cp, LALInferenceVariables *proposedParams)
	Ensemble stretch moves - see http://dx.doi.org/10.2140/camcos.2010.5.65. More...

REAL8	LALInferenceEnsembleStretchIntrinsic (LALInferenceThreadState thread, LALInferenceVariables cp, LALInferenceVariables *pp)

REAL8	LALInferenceEnsembleStretchExtrinsic (LALInferenceThreadState thread, LALInferenceVariables cp, LALInferenceVariables *pp)

REAL8	LALInferenceEnsembleStretchNames (LALInferenceThreadState thread, LALInferenceVariables cpi, LALInferenceVariables ppi, const char *names)

REAL8	LALInferenceEnsembleWalkFull (LALInferenceThreadState thread, LALInferenceVariables cp, LALInferenceVariables *proposedParams)

REAL8	LALInferenceEnsembleWalkIntrinsic (LALInferenceThreadState thread, LALInferenceVariables cp, LALInferenceVariables *pp)

REAL8	LALInferenceEnsembleWalkExtrinsic (LALInferenceThreadState thread, LALInferenceVariables cp, LALInferenceVariables *pp)

REAL8	LALInferenceEnsembleWalkNames (LALInferenceThreadState thread, LALInferenceVariables cpi, LALInferenceVariables ppi, const char *names)

REAL8	LALInferenceSplineCalibrationProposal (LALInferenceThreadState thread, LALInferenceVariables cp, LALInferenceVariables *pp)
	Proposes jumps in the spline calibration parameters, if present. More...

Go to the source code of this file.

Data Structures
struct	LALInferenceClusteredKDE
	Struct to hold clustered-KDE estimates. More...

Macros
#define	MAX_STRLEN 512

#define	ADAPTSUFFIX "adapt_sigma"

#define	ACCEPTSUFFIX "accepted"

#define	PROPOSEDSUFFIX "proposed"

Variables
const char *const	cycleArrayName

const char *const	cycleArrayLengthName

const char *const	cycleArrayCounterName

const char *const	nullProposalName

const char *const	singleAdaptProposalName

const char *const	singleProposalName

const char *const	orbitalPhaseJumpName

const char *const	covarianceEigenvectorJumpName

const char *const	skyLocWanderJumpName

const char *const	differentialEvolutionFullName

const char *const	differentialEvolutionIntrinsicName

const char *const	differentialEvolutionExtrinsicName

const char *const	ensembleStretchFullName

const char *const	ensembleStretchIntrinsicName

const char *const	ensembleStretchExtrinsicName

const char *const	drawApproxPriorName

const char *const	drawFlatPriorName

const char *const	skyReflectDetPlaneName

const char *const	skyRingProposalName

const char *const	PSDFitJumpName

const char *const	polarizationPhaseJumpName

const char *const	polarizationCorrPhaseJumpName

const char *const	extrinsicParamProposalName

const char *const	frequencyBinJumpName

const char *const	GlitchMorletJumpName

const char *const	GlitchMorletReverseJumpName

const char *const	ensembleWalkFullName

const char *const	ensembleWalkIntrinsicName

const char *const	ensembleWalkExtrinsicName

const char *const	clusteredKDEProposalName

Prototypes

Data Structures

Macros

Variables