Data Structures | |
class | LIGOLWContentHandlerExtractSimInspiralTable |
class | LIGOLWContentHandlerExtractSimBurstTable |
Variables | |
parser = OptionParser(USAGE) | |
dest | |
help | |
metavar | |
action | |
callback | |
multipleFileCB | |
default | |
None | |
type | |
False | |
True | |
opts | |
args | |
list | datafiles = [] |
list | fixedBurnins = [int(fixedBurnin) for fixedBurnin in opts.fixedBurnin] |
archive | |
list | polParams = ['psi','polarisation','polarization'] |
list | skyParams = ['ra','rightascension','declination','dec'] |
list | timeParams = ['time'] |
list | ellParams = ['alpha','polar_eccentricity','polar_angle'] |
list | burstParams = ['frequency','loghrss','quality','hrss','duration'] |
list | phaseParams = ['phase','phi_orb'] |
list | endTimeParams = [] |
list | statsParams = ['logl'] |
list | calibParams = ['calpha_l1','calpha_h1','calamp_l1','calamp_h1'] |
list | oneDMenu = polParams + skyParams + timeParams + statsParams+burstParams+ellParams+phaseParams+calibParams |
list | ifos_menu = ['h1','l1','v1'] |
list | twoDGreedyMenu = [] |
dictionary | greedyBinSizes = {'time':1e-4,'ra':0.05,'dec':0.05,'polarisation':0.04,'rightascension':0.05,'declination':0.05, 'loghrss':0.01,'frequency':0.5,'quality':0.05,'phase':0.1,'phi_orb':0.1,'psi':0.04,'polarization':0.04,'alpha':0.01,'duration':0.0001,'calamp_l1':0.01,'calamp_h1':0.01,'calpha_h1':0.01,'calpha_l1':0.01,'polar_eccentricity':0.01} |
list | confidenceLevels = [0.67,0.9,0.95,0.99] |
list | twoDplots = twoDGreedyMenu |
injfile | |
eventnum | |
trigfile | |
trignum | |
skyres | |
dievidence | |
boxing | |
difactor | |
ellevidence | |
bayesfactornoise | |
bsn | |
bayesfactorcoherent | |
snrfactor | |
ns_flag | |
ns | |
ns_Nlive | |
ss_flag | |
ss | |
ss_spin_flag | |
li_flag | |
lalinfmcmc | |
deltaLogL | |
nDownsample | |
downsample | |
oldMassConvention | |
fm_flag | |
noacf | |
twodkdeplots | |
RconvergenceTests | |
savepdfs | |
covarianceMatrices | |
meanVectors | |
header | |
psd_files | |
statsonly | |
def cbcBayesBurstPostProc.email_notify | ( | address, | |
path | |||
) |
Definition at line 64 of file cbcBayesBurstPostProc.py.
def cbcBayesBurstPostProc.pickle_to_file | ( | obj, | |
fname | |||
) |
Pickle/serialize 'obj' into 'fname'.
Definition at line 155 of file cbcBayesBurstPostProc.py.
def cbcBayesBurstPostProc.oneD_dict_to_file | ( | dict, | |
fname | |||
) |
Definition at line 160 of file cbcBayesBurstPostProc.py.
def cbcBayesBurstPostProc.multipleFileCB | ( | opt, | |
opt_str, | |||
value, | |||
parser | |||
) |
Definition at line 165 of file cbcBayesBurstPostProc.py.
def cbcBayesBurstPostProc.dict2html | ( | d, | |
parent = None |
|||
) |
Definition at line 191 of file cbcBayesBurstPostProc.py.
def cbcBayesBurstPostProc.extract_hdf5_metadata | ( | h5grp, | |
parent = None |
|||
) |
Definition at line 203 of file cbcBayesBurstPostProc.py.
def cbcBayesBurstPostProc.cbcBayesBurstPostProc | ( | outdir, | |
data, | |||
oneDMenu, | |||
twoDGreedyMenu, | |||
GreedyRes, | |||
confidence_levels, | |||
twoDplots, | |||
injfile = None , |
|||
eventnum = None , |
|||
trigfile = None , |
|||
trignum = None , |
|||
skyres = None , |
|||
dievidence = False , |
|||
boxing = 64 , |
|||
difactor = 1.0 , |
|||
ellevidence = False , |
|||
bayesfactornoise = None , |
|||
bayesfactorcoherent = None , |
|||
snrfactor = None , |
|||
ns_flag = False , |
|||
ns_Nlive = None , |
|||
ss_flag = False , |
|||
ss_spin_flag = False , |
|||
li_flag = False , |
|||
deltaLogL = None , |
|||
fixedBurnins = None , |
|||
nDownsample = None , |
|||
oldMassConvention = False , |
|||
fm_flag = False , |
|||
noacf = False , |
|||
twodkdeplots = False , |
|||
RconvergenceTests = False , |
|||
savepdfs = True , |
|||
covarianceMatrices = None , |
|||
meanVectors = None , |
|||
header = None , |
|||
psd_files = None , |
|||
statsonly = False |
|||
) |
This is a demonstration script for using the functionality/data structures contained in lalinference.bayespputils .
It will produce a webpage from a file containing posterior samples generated by the parameter estimation codes with 1D/2D plots and stats from the marginal posteriors for each parameter/set of parameters.
Definition at line 219 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.parser = OptionParser(USAGE) |
Definition at line 1197 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.dest |
Definition at line 1198 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.help |
Definition at line 1198 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.metavar |
Definition at line 1198 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.action |
Definition at line 1199 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.callback |
Definition at line 1199 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.multipleFileCB |
Definition at line 1199 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.default |
Definition at line 1201 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.None |
Definition at line 1204 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.type |
Definition at line 1204 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.False |
Definition at line 1209 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.True |
Definition at line 1238 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.opts |
Definition at line 1245 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.args |
Definition at line 1245 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.datafiles = [] |
Definition at line 1247 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.fixedBurnins = [int(fixedBurnin) for fixedBurnin in opts.fixedBurnin] |
Definition at line 1254 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.archive |
Definition at line 1258 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.polParams = ['psi','polarisation','polarization'] |
Definition at line 1261 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.skyParams = ['ra','rightascension','declination','dec'] |
Definition at line 1262 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.timeParams = ['time'] |
Definition at line 1263 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.ellParams = ['alpha','polar_eccentricity','polar_angle'] |
Definition at line 1264 of file cbcBayesBurstPostProc.py.
Definition at line 1265 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.phaseParams = ['phase','phi_orb'] |
Definition at line 1266 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.endTimeParams = [] |
Definition at line 1268 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.statsParams = ['logl'] |
Definition at line 1270 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.calibParams = ['calpha_l1','calpha_h1','calamp_l1','calamp_h1'] |
Definition at line 1271 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.oneDMenu = polParams + skyParams + timeParams + statsParams+burstParams+ellParams+phaseParams+calibParams |
Definition at line 1272 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.ifos_menu = ['h1','l1','v1'] |
Definition at line 1274 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.twoDGreedyMenu = [] |
Definition at line 1280 of file cbcBayesBurstPostProc.py.
dictionary cbcBayesBurstPostProc.greedyBinSizes = {'time':1e-4,'ra':0.05,'dec':0.05,'polarisation':0.04,'rightascension':0.05,'declination':0.05, 'loghrss':0.01,'frequency':0.5,'quality':0.05,'phase':0.1,'phi_orb':0.1,'psi':0.04,'polarization':0.04,'alpha':0.01,'duration':0.0001,'calamp_l1':0.01,'calamp_h1':0.01,'calpha_h1':0.01,'calpha_l1':0.01,'polar_eccentricity':0.01} |
Definition at line 1303 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.confidenceLevels = [0.67,0.9,0.95,0.99] |
Definition at line 1315 of file cbcBayesBurstPostProc.py.
list cbcBayesBurstPostProc.twoDplots = twoDGreedyMenu |
Definition at line 1318 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.injfile |
Definition at line 1323 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.eventnum |
Definition at line 1323 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.trigfile |
Definition at line 1324 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.trignum |
Definition at line 1324 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.skyres |
Definition at line 1325 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.dievidence |
Definition at line 1327 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.boxing |
Definition at line 1327 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.difactor |
Definition at line 1327 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.ellevidence |
Definition at line 1329 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.bayesfactornoise |
Definition at line 1331 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.bsn |
Definition at line 1331 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.bayesfactorcoherent |
Definition at line 1331 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.snrfactor |
Definition at line 1333 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.ns_flag |
Definition at line 1335 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.ns |
Definition at line 1335 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.ns_Nlive |
Definition at line 1335 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.ss_flag |
Definition at line 1337 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.ss |
Definition at line 1337 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.ss_spin_flag |
Definition at line 1337 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.li_flag |
Definition at line 1339 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.lalinfmcmc |
Definition at line 1339 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.deltaLogL |
Definition at line 1339 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.nDownsample |
Definition at line 1339 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.downsample |
Definition at line 1339 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.oldMassConvention |
Definition at line 1339 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.fm_flag |
Definition at line 1341 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.noacf |
Definition at line 1343 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.twodkdeplots |
Definition at line 1346 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.RconvergenceTests |
Definition at line 1348 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.savepdfs |
Definition at line 1350 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.covarianceMatrices |
Definition at line 1352 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.meanVectors |
Definition at line 1354 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.header |
Definition at line 1356 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.psd_files |
Definition at line 1358 of file cbcBayesBurstPostProc.py.
cbcBayesBurstPostProc.statsonly |
Definition at line 1359 of file cbcBayesBurstPostProc.py.