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LALPulsar 7.1.1.1-ea7c608
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lalpulsar.knope_utils.knopeDAG Class Reference

Detailed Description

Definition at line 56 of file knope_utils.py.

Inherits pipeline.CondorDAG.

Public Member Functions

def __init__ (self, cp, configfilename, pulsarlist=None)
 Initialise with ConfigParser cp object and the filename of the config file. More...
 
def setup_results_pages (self)
 Setup the results webpage creation. More...
 
def setup_preprocessing (self)
 Setup the preprocessing analysis: data finding, segment finding and heterodyne/splinter data processing. More...
 
def setup_parameter_estimation (self)
 Setup parameter estimation jobs/nodes for signal and background analyses. More...
 
def create_prior_file (self, psr, psrdir, detectors, freqfactors, outputpath, scalefactor=25.0)
 Create the prior file to use for a particular job defined by a set of detectors, or single detector, and a set of frequency factors, or a single frequency factor. More...
 
def fermidirac_rsigma (self, ul, mufrac=0.4, cdf=0.95)
 Calculate the r and sigma parameter of the Fermi-Dirac distribution to be used. More...
 
def gmm_prior (self, prevpostfile, pardict, ncomps=20, taper=None, decaywidth=5.0)
 Create an ND Gaussian Mixture Model for use as a prior. More...
 
def setup_heterodyne (self)
 Setup the coarse and fine heterodyne jobs/nodes. More...
 
def setup_splinter (self)
 Setup the Spectral Interpolation jobs/nodes. More...
 
def get_ephemeris (self, psr)
 Get the ephemeris file information based on the content of the psr file. More...
 
def concatenate_files (self)
 Create jobs to concatenate fine heterodyned/Splinter data files in cases where multiple files exist (e.g. More...
 
def get_config_option (self, section, option, cftype=None, default=None, allownone=False)
 Get a value of type cftype ('string', 'int', 'float', 'boolean', 'list', 'dict' or 'dir') from the configuration parser object. More...
 
def check_universe (self, universe)
 Check Condor universe is 'local', 'vanilla' or 'standard'. More...
 
def setup_datafind (self)
 Create and setup the data find jobs. More...
 
def set_datafind_nodes (self)
 Add data find nodes to a dictionary of nodes. More...
 
def find_data_segments (self, starttime, endtime, ifo, outfile)
 Find data segments and output them to an acsii text segment file containing the start and end times of each segment. More...
 
def find_exec_file (self, filename)
 Search through the PATH environment for the first instance of the executable file "filename". More...
 
def mkdirs (self, path)
 Helper function. More...
 

Data Fields

 error_code
 
 warning_code
 
 config
 
 pulsarlist
 
 postonly
 
 rundir
 
 ifos
 
 freq_factors
 
 preprocessing_base_dir
 
 starttime
 
 endtime
 
 ndatasets
 
 engine
 
 ephem_path
 
 accounting_group
 
 accounting_group_user
 
 run_dir
 
 log_dir
 
 daglogfile
 
 autonomous
 
 initial_start
 
 pulsar_param_dir
 
 unmodified_pulsars
 
 modified_pulsars
 
 modification_files
 
 param_files
 
 analysed_pulsars
 
 skipped_pulsars
 
 segment_file_update
 
 preprocessing_only
 
 remove_job
 
 processed_files
 
 results_basedir
 
 results_pulsar_dir
 
 results_pulsar_ini
 
 results_pulsar_url
 
 results_url
 
 results_exec
 
 results_universe
 
 collate_exec
 
 injection
 
 use_gw_phase
 
 upper_limit
 
 show_all_posteriors
 
 subtract_truths
 
 show_priors
 
 copy_all_files
 
 pe_exec
 
 pe_universe
 
 pe_nest2pos_nodes
 
 pe_nest2pos_background_nodes
 
 pe_incoherent_only
 
 pe_coherent_only
 
 pe_num_background
 
 pe_output_basedir
 
 pe_output_background_basedir
 
 pe_nlive
 
 pe_nruns
 
 pe_tolerance
 
 pe_random_seed
 
 pe_nmcmc
 
 pe_nmcmc_initial
 
 pe_non_gr
 
 pe_starttime
 
 pe_endtime
 
 pe_truncate_time
 
 pe_truncate_samples
 
 pe_truncate_fraction
 
 pe_nruns_background
 
 pe_nlive_background
 
 pe_roq
 
 pe_roq_ntraining
 
 pe_roq_tolerance
 
 pe_roq_uniform
 
 pe_roq_chunkmax
 
 pe_model_type
 
 pe_biaxial
 
 pe_gaussian_like
 
 pe_prior_options
 
 pe_premade_prior_file
 
 pe_derive_amplitude_prior
 
 pe_amplitude_prior_file
 
 pe_previous_posterior_files
 
 pe_previous_posteriors_file
 
 pe_prior_info
 
 pe_prior_asds
 
 pe_amplitude_prior_asds
 
 pe_amplitude_prior_obstimes
 
 pe_amplitude_prior_type
 
 pe_use_parameter_errors
 
 pe_n2p_exec
 
 pe_posterior_basedir
 
 pe_posterior_background_basedir
 
 pe_clean_nest_samples
 
 pe_request_memory
 
 pe_combinations
 
 pe_prior_files
 
 pe_cor_files
 
 heterodyne_exec
 
 heterodyne_universe
 
 coarse_heterodyne_filter_knee
 
 coarse_heterodyne_sample_rate
 
 coarse_heterodyne_resample_rate
 
 coarse_heterodyne_channels
 
 coarse_heterodyne_binary_output
 
 coarse_heterodyne_gzip_output
 
 coarse_heterodyne_request_memory
 
 coarse_heterodyne_max_data_length
 
 fine_heterodyne_resample_rate
 
 fine_heterodyne_stddev_thresh
 
 fine_heterodyne_gzip_output
 
 fine_heterodyne_request_memory
 
 fine_heterodyne_nodes
 
 modified_pulsars_segment_list_tmp
 
 splinter_exec
 
 splinter_modified_pars
 
 splinter_unmodified_pars
 
 splinter_universe
 
 splinter_request_memory
 
 splinter_bandwidth
 
 splinter_freq_range
 
 splinter_stddev_thresh
 
 splinter_min_seg_length
 
 splinter_max_seg_length
 
 splinter_gzip_output
 
 splinter_nodes_modified
 
 splinter_nodes_unmodified
 
 splinter_modified_pulsar_dir
 
 splinter_unmodified_pulsar_dir
 
 splinter_data_location
 
 splinter_dir
 
 concat_nodes
 
 cache_files
 
 datafind_job
 
 datafind_nodes
 

Constructor & Destructor Documentation

◆ __init__()

def lalpulsar.knope_utils.knopeDAG.__init__ (   self,
  cp,
  configfilename,
  pulsarlist = None 
)

Initialise with ConfigParser cp object and the filename of the config file.

If an error occurs the error_code variables will be set to -1. The value will stay as 0 on success.

Definition at line 62 of file knope_utils.py.

Member Function Documentation

◆ setup_results_pages()

def lalpulsar.knope_utils.knopeDAG.setup_results_pages (   self)

Setup the results webpage creation.

Definition at line 759 of file knope_utils.py.

◆ setup_preprocessing()

def lalpulsar.knope_utils.knopeDAG.setup_preprocessing (   self)

Setup the preprocessing analysis: data finding, segment finding and heterodyne/splinter data processing.

Definition at line 1272 of file knope_utils.py.

◆ setup_parameter_estimation()

def lalpulsar.knope_utils.knopeDAG.setup_parameter_estimation (   self)

Setup parameter estimation jobs/nodes for signal and background analyses.

Definition at line 1299 of file knope_utils.py.

◆ create_prior_file()

def lalpulsar.knope_utils.knopeDAG.create_prior_file (   self,
  psr,
  psrdir,
  detectors,
  freqfactors,
  outputpath,
  scalefactor = 25.0 
)

Create the prior file to use for a particular job defined by a set of detectors, or single detector, and a set of frequency factors, or a single frequency factor.

If creating an prior limit based on a set of given amplitude spectral densities (by calculating an estimate of the 95% UL they would produce) then it will additionally be scaled by a factor of scalefactor.

Return the full output file and the create prior node

Definition at line 2030 of file knope_utils.py.

◆ fermidirac_rsigma()

def lalpulsar.knope_utils.knopeDAG.fermidirac_rsigma (   self,
  ul,
  mufrac = 0.4,
  cdf = 0.95 
)

Calculate the r and sigma parameter of the Fermi-Dirac distribution to be used.

Based on the definition of the distribution given in https://www.authorea.com/users/50521/articles/65214/_show_article the distribution will be defined by a mu parameter at which the distribution has 50% of it's maximum probability, and mufrac which is the fraction of mu defining the range from which the distribution falls from 97.5% of the maximum down to 2.5%. Using an upper limit defining a given cdf of the distribution the parameters r and sigma will be returned.

Definition at line 2807 of file knope_utils.py.

◆ gmm_prior()

def lalpulsar.knope_utils.knopeDAG.gmm_prior (   self,
  prevpostfile,
  pardict,
  ncomps = 20,
  taper = None,
  decaywidth = 5.0 
)

Create an ND Gaussian Mixture Model for use as a prior.

This will use the BayesianGaussianMixture Model from scikit-learn, which fits a Dirichlet Process Gaussian Mixture Model to the input data infering the number of components required. The input to this should be a previously calculated posterior sample file, or numpy array of samples. If a files is given then the parameters given as keys in the pardict ordered dictionary will be extracted. For each parameter name key in the pardict ordered there should be pairs of hard upper an lower limits of the particular parameters. If any of these are not +/-infinity then the samples will be duplicated and reflected around that limit. This is to avoid edge effects for the inferred Gaussian distributions. ncomps sets the hyperparameter used in the Dirichlet process related to the number of Gaussian components.

taper sets whether or not to taper-off any reflected samples, and how that tapering happens. Tapering can use: a 'gaussian' taper, where the half-width of the Gaussian is set by the range of the samples multiplied by decaywidth; a 'triangular' taper, which falls from one to zero over the range of the samples; an 'exponential' taper, where the decay constant is defined by 'decaywidth' multiplied by the range of the samples; or, an 'elliptical' taper, where the axis of the ellipse is set by 'decaywidth' multiplied by the range of the samples. The default is that no tapering is applied, and it should be noted that tapering can still leave artifacts in the final GMM.

The means, covariance matrices and weights of the Gaussian components will be returned, along with the full set of points (including reflected points) used for the estimation.

An example of using this would be for "H0" versus "COSIOTA", in which case the pardict might be:

‍pardict = OrderedDict() pardict['H0'] = [0., np.inf] pardict['COSIOTA'] = [-1., 1.]

Definition at line 2852 of file knope_utils.py.

◆ setup_heterodyne()

def lalpulsar.knope_utils.knopeDAG.setup_heterodyne (   self)

Setup the coarse and fine heterodyne jobs/nodes.

Definition at line 3024 of file knope_utils.py.

◆ setup_splinter()

def lalpulsar.knope_utils.knopeDAG.setup_splinter (   self)

Setup the Spectral Interpolation jobs/nodes.

Definition at line 3630 of file knope_utils.py.

◆ get_ephemeris()

def lalpulsar.knope_utils.knopeDAG.get_ephemeris (   self,
  psr 
)

Get the ephemeris file information based on the content of the psr file.

Definition at line 4041 of file knope_utils.py.

◆ concatenate_files()

def lalpulsar.knope_utils.knopeDAG.concatenate_files (   self)

Create jobs to concatenate fine heterodyned/Splinter data files in cases where multiple files exist (e.g.

in automated search). Go though the processed file list and find ones that have more than one file, also also remove previous files.

Definition at line 4091 of file knope_utils.py.

◆ get_config_option()

def lalpulsar.knope_utils.knopeDAG.get_config_option (   self,
  section,
  option,
  cftype = None,
  default = None,
  allownone = False 
)

Get a value of type cftype ('string', 'int', 'float', 'boolean', 'list', 'dict' or 'dir') from the configuration parser object.

Return value on success and None on failure

Definition at line 4262 of file knope_utils.py.

◆ check_universe()

def lalpulsar.knope_utils.knopeDAG.check_universe (   self,
  universe 
)

Check Condor universe is 'local', 'vanilla' or 'standard'.

Definition at line 4408 of file knope_utils.py.

◆ setup_datafind()

def lalpulsar.knope_utils.knopeDAG.setup_datafind (   self)

Create and setup the data find jobs.

Definition at line 4417 of file knope_utils.py.

◆ set_datafind_nodes()

def lalpulsar.knope_utils.knopeDAG.set_datafind_nodes (   self)

Add data find nodes to a dictionary of nodes.

Definition at line 4554 of file knope_utils.py.

◆ find_data_segments()

def lalpulsar.knope_utils.knopeDAG.find_data_segments (   self,
  starttime,
  endtime,
  ifo,
  outfile 
)

Find data segments and output them to an acsii text segment file containing the start and end times of each segment.

Pairs of start and end times in the starttime and endtime lists will be iterated over and all segments within those pair will be concatenated into the final file.

Args: starttime (list): a list of GPS start times endtime (list): a list of GPS end times ifo (str): a detector name, e.g., 'H1' outfile (str): the file to output the segment list file to

Definition at line 4671 of file knope_utils.py.

◆ find_exec_file()

def lalpulsar.knope_utils.knopeDAG.find_exec_file (   self,
  filename 
)

Search through the PATH environment for the first instance of the executable file "filename".

Definition at line 4853 of file knope_utils.py.

◆ mkdirs()

def lalpulsar.knope_utils.knopeDAG.mkdirs (   self,
  path 
)

Helper function.

Make the given directory, creating intermediate dirs if necessary, and don't complain about it already existing.

Definition at line 4870 of file knope_utils.py.

Field Documentation

◆ error_code

lalpulsar.knope_utils.knopeDAG.error_code

Definition at line 64 of file knope_utils.py.

◆ warning_code

lalpulsar.knope_utils.knopeDAG.warning_code

Definition at line 67 of file knope_utils.py.

◆ config

lalpulsar.knope_utils.knopeDAG.config

Definition at line 68 of file knope_utils.py.

◆ pulsarlist

lalpulsar.knope_utils.knopeDAG.pulsarlist

Definition at line 71 of file knope_utils.py.

◆ postonly

lalpulsar.knope_utils.knopeDAG.postonly

Definition at line 78 of file knope_utils.py.

◆ rundir

lalpulsar.knope_utils.knopeDAG.rundir

Definition at line 109 of file knope_utils.py.

◆ ifos

lalpulsar.knope_utils.knopeDAG.ifos

Definition at line 119 of file knope_utils.py.

◆ freq_factors

lalpulsar.knope_utils.knopeDAG.freq_factors

Definition at line 146 of file knope_utils.py.

◆ preprocessing_base_dir

lalpulsar.knope_utils.knopeDAG.preprocessing_base_dir

Definition at line 181 of file knope_utils.py.

◆ starttime

lalpulsar.knope_utils.knopeDAG.starttime

Definition at line 198 of file knope_utils.py.

◆ endtime

lalpulsar.knope_utils.knopeDAG.endtime

Definition at line 247 of file knope_utils.py.

◆ ndatasets

lalpulsar.knope_utils.knopeDAG.ndatasets

Definition at line 297 of file knope_utils.py.

◆ engine

lalpulsar.knope_utils.knopeDAG.engine

Definition at line 313 of file knope_utils.py.

◆ ephem_path

lalpulsar.knope_utils.knopeDAG.ephem_path

Definition at line 333 of file knope_utils.py.

◆ accounting_group

lalpulsar.knope_utils.knopeDAG.accounting_group

Definition at line 340 of file knope_utils.py.

◆ accounting_group_user

lalpulsar.knope_utils.knopeDAG.accounting_group_user

Definition at line 355 of file knope_utils.py.

◆ run_dir

lalpulsar.knope_utils.knopeDAG.run_dir

Definition at line 363 of file knope_utils.py.

◆ log_dir

lalpulsar.knope_utils.knopeDAG.log_dir

Definition at line 371 of file knope_utils.py.

◆ daglogfile

lalpulsar.knope_utils.knopeDAG.daglogfile

Definition at line 384 of file knope_utils.py.

◆ autonomous

lalpulsar.knope_utils.knopeDAG.autonomous

Definition at line 399 of file knope_utils.py.

◆ initial_start

lalpulsar.knope_utils.knopeDAG.initial_start

Definition at line 413 of file knope_utils.py.

◆ pulsar_param_dir

lalpulsar.knope_utils.knopeDAG.pulsar_param_dir

Definition at line 424 of file knope_utils.py.

◆ unmodified_pulsars

lalpulsar.knope_utils.knopeDAG.unmodified_pulsars

Definition at line 445 of file knope_utils.py.

◆ modified_pulsars

lalpulsar.knope_utils.knopeDAG.modified_pulsars

Definition at line 448 of file knope_utils.py.

◆ modification_files

lalpulsar.knope_utils.knopeDAG.modification_files

Definition at line 451 of file knope_utils.py.

◆ param_files

lalpulsar.knope_utils.knopeDAG.param_files

Definition at line 457 of file knope_utils.py.

◆ analysed_pulsars

lalpulsar.knope_utils.knopeDAG.analysed_pulsars

Definition at line 488 of file knope_utils.py.

◆ skipped_pulsars

lalpulsar.knope_utils.knopeDAG.skipped_pulsars

Definition at line 491 of file knope_utils.py.

◆ segment_file_update

lalpulsar.knope_utils.knopeDAG.segment_file_update

Definition at line 624 of file knope_utils.py.

◆ preprocessing_only

lalpulsar.knope_utils.knopeDAG.preprocessing_only

Definition at line 635 of file knope_utils.py.

◆ remove_job

lalpulsar.knope_utils.knopeDAG.remove_job

Definition at line 643 of file knope_utils.py.

◆ processed_files

lalpulsar.knope_utils.knopeDAG.processed_files

Definition at line 649 of file knope_utils.py.

◆ results_basedir

lalpulsar.knope_utils.knopeDAG.results_basedir

Definition at line 762 of file knope_utils.py.

◆ results_pulsar_dir

lalpulsar.knope_utils.knopeDAG.results_pulsar_dir

Definition at line 763 of file knope_utils.py.

◆ results_pulsar_ini

lalpulsar.knope_utils.knopeDAG.results_pulsar_ini

Definition at line 766 of file knope_utils.py.

◆ results_pulsar_url

lalpulsar.knope_utils.knopeDAG.results_pulsar_url

Definition at line 769 of file knope_utils.py.

◆ results_url

lalpulsar.knope_utils.knopeDAG.results_url

Definition at line 775 of file knope_utils.py.

◆ results_exec

lalpulsar.knope_utils.knopeDAG.results_exec

Definition at line 778 of file knope_utils.py.

◆ results_universe

lalpulsar.knope_utils.knopeDAG.results_universe

Definition at line 783 of file knope_utils.py.

◆ collate_exec

lalpulsar.knope_utils.knopeDAG.collate_exec

Definition at line 806 of file knope_utils.py.

◆ injection

lalpulsar.knope_utils.knopeDAG.injection

Definition at line 832 of file knope_utils.py.

◆ use_gw_phase

lalpulsar.knope_utils.knopeDAG.use_gw_phase

Definition at line 835 of file knope_utils.py.

◆ upper_limit

lalpulsar.knope_utils.knopeDAG.upper_limit

Definition at line 842 of file knope_utils.py.

◆ show_all_posteriors

lalpulsar.knope_utils.knopeDAG.show_all_posteriors

Definition at line 847 of file knope_utils.py.

◆ subtract_truths

lalpulsar.knope_utils.knopeDAG.subtract_truths

Definition at line 852 of file knope_utils.py.

◆ show_priors

lalpulsar.knope_utils.knopeDAG.show_priors

Definition at line 857 of file knope_utils.py.

◆ copy_all_files

lalpulsar.knope_utils.knopeDAG.copy_all_files

Definition at line 863 of file knope_utils.py.

◆ pe_exec

lalpulsar.knope_utils.knopeDAG.pe_exec

Definition at line 1302 of file knope_utils.py.

◆ pe_universe

lalpulsar.knope_utils.knopeDAG.pe_universe

Definition at line 1326 of file knope_utils.py.

◆ pe_nest2pos_nodes

lalpulsar.knope_utils.knopeDAG.pe_nest2pos_nodes

Definition at line 1330 of file knope_utils.py.

◆ pe_nest2pos_background_nodes

lalpulsar.knope_utils.knopeDAG.pe_nest2pos_background_nodes

Definition at line 1333 of file knope_utils.py.

◆ pe_incoherent_only

lalpulsar.knope_utils.knopeDAG.pe_incoherent_only

Definition at line 1337 of file knope_utils.py.

◆ pe_coherent_only

lalpulsar.knope_utils.knopeDAG.pe_coherent_only

Definition at line 1344 of file knope_utils.py.

◆ pe_num_background

lalpulsar.knope_utils.knopeDAG.pe_num_background

Definition at line 1351 of file knope_utils.py.

◆ pe_output_basedir

lalpulsar.knope_utils.knopeDAG.pe_output_basedir

Definition at line 1361 of file knope_utils.py.

◆ pe_output_background_basedir

lalpulsar.knope_utils.knopeDAG.pe_output_background_basedir

Definition at line 1371 of file knope_utils.py.

◆ pe_nlive

lalpulsar.knope_utils.knopeDAG.pe_nlive

Definition at line 1388 of file knope_utils.py.

◆ pe_nruns

lalpulsar.knope_utils.knopeDAG.pe_nruns

Definition at line 1391 of file knope_utils.py.

◆ pe_tolerance

lalpulsar.knope_utils.knopeDAG.pe_tolerance

Definition at line 1394 of file knope_utils.py.

◆ pe_random_seed

lalpulsar.knope_utils.knopeDAG.pe_random_seed

Definition at line 1397 of file knope_utils.py.

◆ pe_nmcmc

lalpulsar.knope_utils.knopeDAG.pe_nmcmc

Definition at line 1400 of file knope_utils.py.

◆ pe_nmcmc_initial

lalpulsar.knope_utils.knopeDAG.pe_nmcmc_initial

Definition at line 1403 of file knope_utils.py.

◆ pe_non_gr

lalpulsar.knope_utils.knopeDAG.pe_non_gr

Definition at line 1406 of file knope_utils.py.

◆ pe_starttime

lalpulsar.knope_utils.knopeDAG.pe_starttime

Definition at line 1411 of file knope_utils.py.

◆ pe_endtime

lalpulsar.knope_utils.knopeDAG.pe_endtime

Definition at line 1414 of file knope_utils.py.

◆ pe_truncate_time

lalpulsar.knope_utils.knopeDAG.pe_truncate_time

Definition at line 1417 of file knope_utils.py.

◆ pe_truncate_samples

lalpulsar.knope_utils.knopeDAG.pe_truncate_samples

Definition at line 1420 of file knope_utils.py.

◆ pe_truncate_fraction

lalpulsar.knope_utils.knopeDAG.pe_truncate_fraction

Definition at line 1423 of file knope_utils.py.

◆ pe_nruns_background

lalpulsar.knope_utils.knopeDAG.pe_nruns_background

Definition at line 1428 of file knope_utils.py.

◆ pe_nlive_background

lalpulsar.knope_utils.knopeDAG.pe_nlive_background

Definition at line 1431 of file knope_utils.py.

◆ pe_roq

lalpulsar.knope_utils.knopeDAG.pe_roq

Definition at line 1436 of file knope_utils.py.

◆ pe_roq_ntraining

lalpulsar.knope_utils.knopeDAG.pe_roq_ntraining

Definition at line 1439 of file knope_utils.py.

◆ pe_roq_tolerance

lalpulsar.knope_utils.knopeDAG.pe_roq_tolerance

Definition at line 1442 of file knope_utils.py.

◆ pe_roq_uniform

lalpulsar.knope_utils.knopeDAG.pe_roq_uniform

Definition at line 1445 of file knope_utils.py.

◆ pe_roq_chunkmax

lalpulsar.knope_utils.knopeDAG.pe_roq_chunkmax

Definition at line 1448 of file knope_utils.py.

◆ pe_model_type

lalpulsar.knope_utils.knopeDAG.pe_model_type

Definition at line 1460 of file knope_utils.py.

◆ pe_biaxial

lalpulsar.knope_utils.knopeDAG.pe_biaxial

Definition at line 1470 of file knope_utils.py.

◆ pe_gaussian_like

lalpulsar.knope_utils.knopeDAG.pe_gaussian_like

Definition at line 1478 of file knope_utils.py.

◆ pe_prior_options

lalpulsar.knope_utils.knopeDAG.pe_prior_options

Definition at line 1487 of file knope_utils.py.

◆ pe_premade_prior_file

lalpulsar.knope_utils.knopeDAG.pe_premade_prior_file

Definition at line 1490 of file knope_utils.py.

◆ pe_derive_amplitude_prior

lalpulsar.knope_utils.knopeDAG.pe_derive_amplitude_prior

Definition at line 1505 of file knope_utils.py.

◆ pe_amplitude_prior_file

lalpulsar.knope_utils.knopeDAG.pe_amplitude_prior_file

Definition at line 1511 of file knope_utils.py.

◆ pe_previous_posterior_files

lalpulsar.knope_utils.knopeDAG.pe_previous_posterior_files

Definition at line 1516 of file knope_utils.py.

◆ pe_previous_posteriors_file

lalpulsar.knope_utils.knopeDAG.pe_previous_posteriors_file

Definition at line 1517 of file knope_utils.py.

◆ pe_prior_info

lalpulsar.knope_utils.knopeDAG.pe_prior_info

Definition at line 1521 of file knope_utils.py.

◆ pe_prior_asds

lalpulsar.knope_utils.knopeDAG.pe_prior_asds

Definition at line 1522 of file knope_utils.py.

◆ pe_amplitude_prior_asds

lalpulsar.knope_utils.knopeDAG.pe_amplitude_prior_asds

Definition at line 1526 of file knope_utils.py.

◆ pe_amplitude_prior_obstimes

lalpulsar.knope_utils.knopeDAG.pe_amplitude_prior_obstimes

Definition at line 1535 of file knope_utils.py.

◆ pe_amplitude_prior_type

lalpulsar.knope_utils.knopeDAG.pe_amplitude_prior_type

Definition at line 1545 of file knope_utils.py.

◆ pe_use_parameter_errors

lalpulsar.knope_utils.knopeDAG.pe_use_parameter_errors

Definition at line 1550 of file knope_utils.py.

◆ pe_n2p_exec

lalpulsar.knope_utils.knopeDAG.pe_n2p_exec

Definition at line 1555 of file knope_utils.py.

◆ pe_posterior_basedir

lalpulsar.knope_utils.knopeDAG.pe_posterior_basedir

Definition at line 1580 of file knope_utils.py.

◆ pe_posterior_background_basedir

lalpulsar.knope_utils.knopeDAG.pe_posterior_background_basedir

Definition at line 1593 of file knope_utils.py.

◆ pe_clean_nest_samples

lalpulsar.knope_utils.knopeDAG.pe_clean_nest_samples

Definition at line 1608 of file knope_utils.py.

◆ pe_request_memory

lalpulsar.knope_utils.knopeDAG.pe_request_memory

Definition at line 1613 of file knope_utils.py.

◆ pe_combinations

lalpulsar.knope_utils.knopeDAG.pe_combinations

Definition at line 1662 of file knope_utils.py.

◆ pe_prior_files

lalpulsar.knope_utils.knopeDAG.pe_prior_files

Definition at line 1674 of file knope_utils.py.

◆ pe_cor_files

lalpulsar.knope_utils.knopeDAG.pe_cor_files

Definition at line 1675 of file knope_utils.py.

◆ heterodyne_exec

lalpulsar.knope_utils.knopeDAG.heterodyne_exec

Definition at line 3027 of file knope_utils.py.

◆ heterodyne_universe

lalpulsar.knope_utils.knopeDAG.heterodyne_universe

Definition at line 3053 of file knope_utils.py.

◆ coarse_heterodyne_filter_knee

lalpulsar.knope_utils.knopeDAG.coarse_heterodyne_filter_knee

Definition at line 3060 of file knope_utils.py.

◆ coarse_heterodyne_sample_rate

lalpulsar.knope_utils.knopeDAG.coarse_heterodyne_sample_rate

Definition at line 3063 of file knope_utils.py.

◆ coarse_heterodyne_resample_rate

lalpulsar.knope_utils.knopeDAG.coarse_heterodyne_resample_rate

Definition at line 3066 of file knope_utils.py.

◆ coarse_heterodyne_channels

lalpulsar.knope_utils.knopeDAG.coarse_heterodyne_channels

Definition at line 3069 of file knope_utils.py.

◆ coarse_heterodyne_binary_output

lalpulsar.knope_utils.knopeDAG.coarse_heterodyne_binary_output

Definition at line 3072 of file knope_utils.py.

◆ coarse_heterodyne_gzip_output

lalpulsar.knope_utils.knopeDAG.coarse_heterodyne_gzip_output

Definition at line 3075 of file knope_utils.py.

◆ coarse_heterodyne_request_memory

lalpulsar.knope_utils.knopeDAG.coarse_heterodyne_request_memory

Definition at line 3078 of file knope_utils.py.

◆ coarse_heterodyne_max_data_length

lalpulsar.knope_utils.knopeDAG.coarse_heterodyne_max_data_length

Definition at line 3081 of file knope_utils.py.

◆ fine_heterodyne_resample_rate

lalpulsar.knope_utils.knopeDAG.fine_heterodyne_resample_rate

Definition at line 3092 of file knope_utils.py.

◆ fine_heterodyne_stddev_thresh

lalpulsar.knope_utils.knopeDAG.fine_heterodyne_stddev_thresh

Definition at line 3095 of file knope_utils.py.

◆ fine_heterodyne_gzip_output

lalpulsar.knope_utils.knopeDAG.fine_heterodyne_gzip_output

Definition at line 3098 of file knope_utils.py.

◆ fine_heterodyne_request_memory

lalpulsar.knope_utils.knopeDAG.fine_heterodyne_request_memory

Definition at line 3101 of file knope_utils.py.

◆ fine_heterodyne_nodes

lalpulsar.knope_utils.knopeDAG.fine_heterodyne_nodes

Definition at line 3130 of file knope_utils.py.

◆ modified_pulsars_segment_list_tmp

lalpulsar.knope_utils.knopeDAG.modified_pulsars_segment_list_tmp

Definition at line 3134 of file knope_utils.py.

◆ splinter_exec

lalpulsar.knope_utils.knopeDAG.splinter_exec

Definition at line 3639 of file knope_utils.py.

◆ splinter_modified_pars

lalpulsar.knope_utils.knopeDAG.splinter_modified_pars

Definition at line 3645 of file knope_utils.py.

◆ splinter_unmodified_pars

lalpulsar.knope_utils.knopeDAG.splinter_unmodified_pars

Definition at line 3646 of file knope_utils.py.

◆ splinter_universe

lalpulsar.knope_utils.knopeDAG.splinter_universe

Definition at line 3669 of file knope_utils.py.

◆ splinter_request_memory

lalpulsar.knope_utils.knopeDAG.splinter_request_memory

Definition at line 3676 of file knope_utils.py.

◆ splinter_bandwidth

lalpulsar.knope_utils.knopeDAG.splinter_bandwidth

Definition at line 3700 of file knope_utils.py.

◆ splinter_freq_range

lalpulsar.knope_utils.knopeDAG.splinter_freq_range

Definition at line 3703 of file knope_utils.py.

◆ splinter_stddev_thresh

lalpulsar.knope_utils.knopeDAG.splinter_stddev_thresh

Definition at line 3706 of file knope_utils.py.

◆ splinter_min_seg_length

lalpulsar.knope_utils.knopeDAG.splinter_min_seg_length

Definition at line 3709 of file knope_utils.py.

◆ splinter_max_seg_length

lalpulsar.knope_utils.knopeDAG.splinter_max_seg_length

Definition at line 3712 of file knope_utils.py.

◆ splinter_gzip_output

lalpulsar.knope_utils.knopeDAG.splinter_gzip_output

Definition at line 3715 of file knope_utils.py.

◆ splinter_nodes_modified

lalpulsar.knope_utils.knopeDAG.splinter_nodes_modified

Definition at line 3732 of file knope_utils.py.

◆ splinter_nodes_unmodified

lalpulsar.knope_utils.knopeDAG.splinter_nodes_unmodified

Definition at line 3733 of file knope_utils.py.

◆ splinter_modified_pulsar_dir

lalpulsar.knope_utils.knopeDAG.splinter_modified_pulsar_dir

Definition at line 3734 of file knope_utils.py.

◆ splinter_unmodified_pulsar_dir

lalpulsar.knope_utils.knopeDAG.splinter_unmodified_pulsar_dir

Definition at line 3735 of file knope_utils.py.

◆ splinter_data_location

lalpulsar.knope_utils.knopeDAG.splinter_data_location

Definition at line 3738 of file knope_utils.py.

◆ splinter_dir

lalpulsar.knope_utils.knopeDAG.splinter_dir

Definition at line 3754 of file knope_utils.py.

◆ concat_nodes

lalpulsar.knope_utils.knopeDAG.concat_nodes

Definition at line 4101 of file knope_utils.py.

◆ cache_files

lalpulsar.knope_utils.knopeDAG.cache_files

Definition at line 4420 of file knope_utils.py.

◆ datafind_job

lalpulsar.knope_utils.knopeDAG.datafind_job

Definition at line 4421 of file knope_utils.py.

◆ datafind_nodes

lalpulsar.knope_utils.knopeDAG.datafind_nodes

Definition at line 4549 of file knope_utils.py.